:py:mod:`RNADiscrepancy.utilities`
==================================

.. py:module:: RNADiscrepancy.utilities

.. autodoc2-docstring:: RNADiscrepancy.utilities
   :allowtitles:

Module Contents
---------------

Functions
~~~~~~~~~

.. list-table::
   :class: autosummary longtable
   :align: left

   * - :py:obj:`rawdata2nucleotide <RNADiscrepancy.utilities.rawdata2nucleotide>`
     - .. autodoc2-docstring:: RNADiscrepancy.utilities.rawdata2nucleotide
          :summary:
   * - :py:obj:`cif2nucleotides <RNADiscrepancy.utilities.cif2nucleotides>`
     - .. autodoc2-docstring:: RNADiscrepancy.utilities.cif2nucleotides
          :summary:

API
~~~

.. py:function:: rawdata2nucleotide(nucleotide_name: str, list_atoms_names: [str], list_atoms_elements: [str], list_positions: [[float, float, float]]) -> RNADiscrepancy.rna.Nucleotide
   :canonical: RNADiscrepancy.utilities.rawdata2nucleotide

   .. autodoc2-docstring:: RNADiscrepancy.utilities.rawdata2nucleotide

.. py:function:: cif2nucleotides(path_cif: str, to_find: [(str, str)], author_chain: bool = False, author_position: bool = False, add_virtual: bool = True) -> dict[(str, str), RNADiscrepancy.rna.Nucleotide | None]
   :canonical: RNADiscrepancy.utilities.cif2nucleotides

   .. autodoc2-docstring:: RNADiscrepancy.utilities.cif2nucleotides